nipype.interfaces.semtools.registration.specialized module¶
Autogenerated file - DO NOT EDIT If you spot a bug, please report it on the mailing list and/or change the generator.
BRAINSDemonWarp¶
Bases: SEMLikeCommandLine
Wrapped executable:
BRAINSDemonWarp.title: Demon Registration (BRAINS)
category: Registration.Specialized
description: This program finds a deformation field to warp a moving image onto a fixed image. The images must be of the same signal kind, and contain an image of the same kind of object. This program uses the Thirion Demons warp software in ITK, the Insight Toolkit. Additional information is available at: http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/BRAINSDemonWarp.
version: 3.0.0
documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/BRAINSDemonWarp
license: https://www.nitrc.org/svn/brains/BuildScripts/trunk/License.txt
contributor: This tool was developed by Hans J. Johnson and Greg Harris.
acknowledgements: The development of this tool was supported by funding from grants NS050568 and NS40068 from the National Institute of Neurological Disorders and Stroke and grants MH31593, MH40856, from the National Institute of Mental Health.
- argsa unicode string
Additional parameters to the command. Maps to a command-line argument:
%s.- arrayOfPyramidLevelIterationsa list of items which are an integer (int or long)
The number of iterations for each pyramid level. Maps to a command-line argument:
--arrayOfPyramidLevelIterations %s.- backgroundFillValuean integer (int or long)
Replacement value to overwrite background when performing BOBF. Maps to a command-line argument:
--backgroundFillValue %d.- checkerboardPatternSubdivisionsa list of items which are an integer (int or long)
Number of Checkerboard subdivisions in all 3 directions. Maps to a command-line argument:
--checkerboardPatternSubdivisions %s.- environa dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’
Environment variables. (Nipype default value:
{})- fixedBinaryVolumea pathlike object or string representing an existing file
Mask filename for desired region of interest in the Fixed image. Maps to a command-line argument:
--fixedBinaryVolume %s.- fixedVolumea pathlike object or string representing an existing file
Required: input fixed (target) image. Maps to a command-line argument:
--fixedVolume %s.- gradient_type‘0’ or ‘1’ or ‘2’
Type of gradient used for computing the demons force (0 is symmetrized, 1 is fixed image, 2 is moving image). Maps to a command-line argument: