BLIMPS (BLocks IMProved Searcher)   Version 3.8  2006/04
(C) Copyright 1993-2000, Fred Hutchinson Cancer Research Center



Block File: exampleC.blk

Target File (s) : example.pros

Records Searched:   89

Scores Done:                      89

Alignments Done:               59658

AC#                    Description                                                Score RF  AA# Length
TC1A_CAEBR|P35072     TRANSPOSABLE ELEMENT TCB1 TRANSPOSASE (TRANSPOSABLE ELEM       913  0   171    273 WVFQQDNDPKH
TC1A_CAEEL|P03934     TRANSPOSABLE ELEMENT TC1 TRANSPOSASE                           899  0   171    273 FVFQQDNDPKH
TC2A_CAEBR|Q04202     TRANSPOSABLE ELEMENT TCB2 TRANSPOSASE                          899  0   171    273 FVFQQDNDPKH
TC3A_CAEEL|P34257     TRANSPOSABLE ELEMENT TC3 TRANSPOSASE                           847  0   225    329 FRFQQDNATIH
TYRA_HAEIN|P43902     CHORISMATE MUTASE (EC 5.4.99.5) (CM) / PREPHENATE DEHYDR       582  0   237    377 akiYQtNATeH
GLGA_METJA|Q59001     PROBABLE GLYCOGEN SYNTHASE (EC 2.4.1.21) (STARCH [BACTER       578  0   449    521 WTFYklNeiCm
PPS2_BACSU|P39846     PEPTIDE SYNTHETASE 2 | PS00012 | PS00455 | PS50075             570  0  2099   2560 WfFsQsleShH
LEF4_NPVAC|P41477     LATE EXPRESSION FACTOR 4                                       564  0   364    464 lRFQQffDPpl
AST5_DROME|P10083     ACHAETE-SCUTE COMPLEX PROTEIN T5 (ACHAETE) | PS00038           555  0   111    201 lhFQQqqqhqH
SPCB_DROME|Q00963     SPECTRIN BETA CHAIN | PS00019 | PS00020 | PS50003              553  0   637   2291 WqFYwDtAdee
VIL1_MOUSE|Q62468     VILLIN                                                         551  0   635    826 FdFnQDdleee
RPOD_ORYSA|P12093     DNA-DIRECTED RNA POLYMERASE BETA" CHAIN (EC 2.7.7.6)           550  0   493   1513 FsLhkDqDQmn
YP22_YEAST|Q08968     HYPOTHETICAL 78.3 KD PROTEIN IN SSM1-GRE1 INTERGENIC REG       549  0    88    688 FnLvQDqDlek
SIN3_YEAST|P22579     PAIRED AMPHIPATHIC HELIX PROTEIN                               544  0   487   1536 haqQQheAQmH
YPB4_CAEEL|Q11107     HYPOTHETICAL ZINC FINGER PROTEIN B03B8.4 IN CHROMOSOME I       544  0   514   2111 slLeQDNqSSs
GLND_MYCTU|Q10961     PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE (EC 2.7.7.59)       538  0   326    808 iVLarDaePeH
YO96_CAEEL|P41846     HYPOTHETICAL 93.9 KD PROTEIN T20B12.6 IN CHROMOSOME III        534  0   120    843 vkLQrsqtPKH
PTP1_DROME|P35992     PROTEIN-TYROSINE PHOSPHATASE 10D PRECURSOR (EC 3.1.3.48)       532  0  1481   1630 rILQQiNtSdy
ACVS_EMENI|P27742     DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHET       531  0  2351   3770 klLrvDNDaSR
YM8I_YEAST|Q03529     HYPOTHETICAL 44.9 KD PROTEIN IN URA10-NRC1 INTERGENIC RE       531  0   166    384 FyvdQihrPrH
THIS_ECOLI|O32583     THIS PROTEIN                                                   529  0    47     66 qhivQDGDQIl
KINN_HUMAN|Q12840     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        528  0   890   1032 rRyQQevDrIk
KINN_MOUSE|P28738     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        528  0   890   1027 rRyQQevDrIk
PH81_YEAST|P17442     PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO81 (CDK        528  0   724   1178 ikLtQDNgiIm
YENR_YEREN|P54295     YENR REGULATORY PROTEIN | PS00622                              519  0   158    244 lgLYQsNsdKn
RPOC_TREPA|O83270     DNA-DIRECTED RNA POLYMERASE BETA' CHAIN (EC 2.7.7.6) (TR       518  0  1277   1416 FIygQqvDkyR
YCF2_MARPO|P09975     HYPOTHETICAL 259 KD PROTEIN (ORF 2136)                         518  0   459   2136 lfFkQkNskSf
OE66_NPVAC|Q00704     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         517  0    65    704 vaFrQnNiQel
CP4C_BLADI|P29981     CYTOCHROME P450 4C1 (EC 1.14.14.1) (CYPIVC1) | PS00086         516  0    18    511 FlFrQgakraR
HOFB_HAEIN|P44622     PROTEIN TRANSPORT PROTEIN HOFB HOMOLOG | PS00662               515  0   367    464 sRLQQlGiQqy
TRA0_SHISO|P16944     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS640               514  0   147    315 rsFhvfaAPKH
YQHN_BACSU|P54512     HYPOTHETICAL 16.7 KD PROTEIN IN GCVT-SPOIIIAA INTERGENIC       514  0   117    142 qyFeeDdArKk
GYRB_ACIS9|Q44276     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       512  0    66    216 WTFsQtifSvd
YOUG_BACLI|Q45292     HYPOTHETICAL 17.3 KD PROTEIN IN GNTR 5'REGION                  512  0   124    147 FRFghieiSeH
MA2X_HUMAN|P49641     ALPHA-MANNOSIDASE IIX (EC 3.2.1.114) (MANNOSYL-OLIGOSACC       506  0   331   1139 WRqtwDsDSSt
NUCL_MOUSE|P09405     NUCLEOLIN (PROTEIN C23) | PS00030                              502  0   420    706 rlvsQDGkSKg
DHA6_YEAST|P54115     ALDEHYDE DEHYDROGENASE, CYTOSOLIC (EC 1.2.1.3) | PS00070       501  0    33    501 FmkaQDGkTyp
MAOC_FLAPR|P36444     MALATE OXIDOREDUCTASE, CHLOROPLAST PRECURSOR (EC 1.1.1.4       501  0   408    647 eIskQtNAPle
MAOX_PHAVU|P12628     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        501  0    81    589 sVFnQelqeKR
RFAB_ECOLI|P27127     LIPOPOLYSACCHARIDE 1,6-GALACTOSYLTRANSFERASE (EC 2.4.1.-       501  0    34    369 tTFrQqhiQSe
ITA2_BOVIN|P53710     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (G (FRAGMENT       497  0    38   1170 yavQQfinPKg
ITA2_HUMAN|P17301     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) (COLL       497  0    49   1181 yavQQfinPKg
GYRB_ACICA|Q43947     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       496  0    34    216 eqeYQhGDPqy
YDIL_ECOLI|P76196     HYPOTHETICAL 15.0 KD PROTEIN IN LPP-AROD INTERGENIC REGI       496  0   107    127 WkiYQsvAael
Y08F_MYCTU|Q11052     PROBABLE REGULATORY PROTEIN CY50.15 | PS50006                  493  0   317    388 iVLdsaNvSrH
HBB1_TRICR|P10785     HEMOGLOBIN BETA-1 CHAIN (MAJOR) | PS01033                      492  0    80    145 kayYaDlsTIH
OE66_NPVOP|O10305     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         490  0   172    682 vTivlDNtPhy
PARF_PARTE|P47244     PARAFUSIN | PS00710                                            490  0   312    582 FgaacDGDadR
NIFK_AZOVI|P07329     NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN (EC 1.18.       489  0   380    522 FlLelgcePvH
CRTI_RHOCA|P17054     PHYTOENE DEHYDROGENASE (EC 1.3.-.-) (PHYTOENE DESATURASE       486  0   103    524 yTaYgDdAkvk
CYRG_MOUSE|P34902     CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR (GAMMA-C        486  0   127    369 FVvQlqdpQKp
SN2L_CAEEL|P41877     POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L                  486  0   623    971 FTvYQfegeny
TRFE_RABIT|P19134     SEROTRANSFERRIN PRECURSOR (SIDEROPHILIN) (BETA-1-METAL B       481  0   457    694 WnnlegkkSCH
RL17_SCHPO|O59794     60S RIBOSOMAL PROTEIN L17 | PS00464                            480  0    43    187 afiflDNvkeH
MAOM_AMAHP|P37224     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 65 KD ISOFORM       477  0   457    623 aIFamsNpTKn
MSH5_YEAST|Q12175     MUTS PROTEIN HOMOLOG 5 | PS00486                               477  0   136    901 WIFdyiktkCd
TRA0_ECOLI|P15025     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS21                476  0   147    390 rRFhvfaAPKq
YFEH_ECOLI|P39836     HYPOTHETICAL 36.4 KD PROTEIN IN XAPB-LIG INTERGENIC REGI       476  0   194    332 WIaktDqtSIl
YBDM_ECOLI|P77174     HYPOTHETICAL 23.9 KD PROTEIN IN CSTA-DSBG INTERGENIC REG       475  0   184    209 lRLkQiNglqe
DPOM_CLAPU|P22373     PROBABLE DNA POLYMERASE (EC 2.7.7.7) | PS00116                 474  0   911   1063 tlyYtDtDSIv
EUTE_ECOLI|P77445     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          469  0    -1    467  mnQQDieQvv
EUTE_SALTY|P41793     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          469  0    -1    467  mnQQDieQvv
YFJJ_ECOLI|P52125     HYPOTHETICAL 24.6 KD PROTEIN IN ALPA-GABD INTERGENIC REG       469  0    98    208 vReYtkNrkrH
MAON_SOLTU|P37225     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 59 KD ISOFORM       465  0    65    601 isFeQqyDrfm
NRAM_INBHK|P16191     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   378    466 lyvkyDGDPwt
NRAM_INBLN|P16193     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   377    465 lyvkyDGDPwt
NRAM_INBMF|P16199     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   377    465 lyvkyDGDPwt
NRAM_INBOR|P16201     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   378    466 lyvkyDGDPwt
NRAM_INBSI|P16203     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   378    466 lyvkyDGDPwt
NRAM_INBUS|P16205     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   378    466 lyvkyDGDPwt
NRAM_INBVI|P16207     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   377    465 lyvkyDGDPwt
NRAM_INBYB|Q90021     NEURAMINIDASE (EC 3.2.1.18)                                    465  0   378    466 lyvkyDGDPwt
MAOX_POPTR|P34105     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        463  0   484    591 FVpgQsNnayi
NRAM_INBBE|P27907     NEURAMINIDASE (EC 3.2.1.18)                                    463  0   377    465 lyvryDGDPwt
YDF7_SCHPO|Q10479     PUTATIVE GLUCOSYLTRANSFERASE C17C9.07 (EC 2.4.1.-)             461  0   400    501 llFtlneAPIk
MAOX_MESCR|P37223     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        460  0   377    585 eTLQQfklPwa
MAOC_LYCES|P37222     MALATE OXIDOREDUCTASE, CHLOROPLAST (EC 1.1.1.4 (FRAGMENT       458  0   272    573 FnLlakygTSH
MAOX_VITVI|P51615     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        457  0   484    591 FVpgQaNnayi
PSRC_WOLSU|P31077     POLYSULFIDE REDUCTASE CHAIN C (SULPHUR REDUCTASE CHAIN C       457  0   234    317 gmyYQgGsTae
GYRB_ACIS8|Q44275     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       456  0   142    216 FlvegDsAggs
MAOM_SOLTU|P37221     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 62 KD ISOFORM       456  0   443    626 FskevleAlKH
NUCL_HUMAN|P19338     NUCLEOLIN (PROTEIN C23) | PS00030                              456  0   685    706 FRggrgGggdH
NOD1_RHIGA|P50331     NODULATION PROTEIN D I | PS00044                               454  0   128    310 elLplDdDPde
GLO2_HUMAN|Q16775     HYDROXYACYLGLUTATHIONE HYDROLASE (EC 3.1.2.6) (GLYOXALAS       450  0   224    260 mRvrektvQqH
GYRB_ACIJO|Q44081     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       447  0    71    216 tIFnvDilarR
GYRB_ACIS1|Q44272     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       447  0    71    216 tIFnvDilarR
GYRB_ACIS6|Q44277     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       445  0    66    216 lTFsQtifSvd
GSHC_SCHMA|Q00277     GLUTATHIONE PEROXIDASE (EC 1.11.1.9) (GPX) | PS00460 | P       443  0    93    169 ygvQfDmfSKi
YNC4_YEAST|P53970     HYPOTHETICAL 27.7 KD PROTEIN IN UME3-HDA1 INTERGENIC REG       422  0    34    246 lkiceDGgeSg
