BLIMPS (BLocks IMProved Searcher)   Version 3.8  2006/04
(C) Copyright 1993-2000, Fred Hutchinson Cancer Research Center



Block File: exampleD.blk

Target File (s) : example.pros

Records Searched:   89

Scores Done:                      89

Alignments Done:               60014

AC#                    Description                                                Score RF  AA# Length
TC1A_CAEEL|P03934     TRANSPOSABLE ELEMENT TC1 TRANSPOSASE                          1107  0   200    273 WPSQSPDLNPIEHLW
TC2A_CAEBR|Q04202     TRANSPOSABLE ELEMENT TCB2 TRANSPOSASE                         1107  0   200    273 WPSQSPDLNPIEHLW
TC1A_CAEBR|P35072     TRANSPOSABLE ELEMENT TCB1 TRANSPOSASE (TRANSPOSABLE ELEM      1100  0   200    273 WPSQSPDLNPIEHMW
TC3A_CAEEL|P34257     TRANSPOSABLE ELEMENT TC3 TRANSPOSASE                          1094  0   254    329 WPARSPDLNPIENLW
CYRG_MOUSE|P34902     CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR (GAMMA-C        686  0   282    369 WleRmPpipPIkNLe
RPOC_TREPA|O83270     DNA-DIRECTED RNA POLYMERASE BETA' CHAIN (EC 2.7.7.6) (TR       678  0   230   1416 iPviPPDLrPmvqLd
RPOD_ORYSA|P12093     DNA-DIRECTED RNA POLYMERASE BETA" CHAIN (EC 2.7.7.6)           672  0  1319   1513 aQSRiSlVNkIqkVY
MAOM_AMAHP|P37224     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 65 KD ISOFORM       667  0   276    623 WPnvivqfedIqNkW
VIL1_MOUSE|Q62468     VILLIN                                                         644  0   401    826 WriedleLvPvEskW
YDF7_SCHPO|Q10479     PUTATIVE GLUCOSYLTRANSFERASE C17C9.07 (EC 2.4.1.-)             637  0   136    501 diflSPgLlIIdHIh
LEF4_NPVAC|P41477     LATE EXPRESSION FACTOR 4                                       636  0    53    464 iPiQSacnNIIssVk
SIN3_YEAST|P22579     PAIRED AMPHIPATHIC HELIX PROTEIN                               635  0   827   1536 iQcletiVNkIENMt
EUTE_ECOLI|P77445     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          634  0   132    467 tPStnPaatVInNai
EUTE_SALTY|P41793     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          634  0   132    467 tPStnPaatVInNai
PH81_YEAST|P17442     PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO81 (CDK        633  0    84   1178 ylAReSDLrIkfNIl
YCF2_MARPO|P09975     HYPOTHETICAL 259 KD PROTEIN (ORF 2136)                         629  0   539   2136 nkikSSDnfrfiNLW
NRAM_INBOR|P16201     NEURAMINIDASE (EC 3.2.1.18)                                    627  0    46    466 aPtmSlDcanIsNVq
GYRB_ACICA|Q43947     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       626  0    62    216 WPSeltftqtIfNVe
PPS2_BACSU|P39846     PEPTIDE SYNTHETASE 2 | PS00012 | PS00455 | PS50075             623  0  1343   2560 hktfSSyLhdIrHLa
PTP1_DROME|P35992     PROTEIN-TYROSINE PHOSPHATASE 10D PRECURSOR (EC 3.1.3.48)       619  0   706   1630 WPSdnPgrvqtkNVs
NIFK_AZOVI|P07329     NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN (EC 1.18.       617  0   307    522 WkhevPkLNIpmgLd
MAOM_SOLTU|P37221     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 62 KD ISOFORM       615  0   458    626 rPAifPmsNPtrNae
GYRB_ACIJO|Q44081     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       614  0    62    216 WPSaetfsqtIfNVd
GYRB_ACIS1|Q44272     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       614  0    62    216 WPSaetfsqtIfNVd
GYRB_ACIS8|Q44275     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       614  0    62    216 WPSaetfsqtIfNVd
SPCB_DROME|Q00963     SPECTRIN BETA CHAIN | PS00019 | PS00020 | PS50003              612  0  2006   2291 WeeRwenLqlIleVY
MAON_SOLTU|P37225     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 59 KD ISOFORM       608  0   477    601 gngkigHVNqanNMY
ITA2_BOVIN|P53710     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (G (FRAGMENT       607  0   981   1170 iPqytkDkNPlmyLt
ACVS_EMENI|P27742     DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHET       606  0  2768   3770 nklRSgfrgPIyNaY
YFEH_ECOLI|P39836     HYPOTHETICAL 36.4 KD PROTEIN IN XAPB-LIG INTERGENIC REGI       606  0    23    332 fPARgdfVpffENLt
YP22_YEAST|Q08968     HYPOTHETICAL 78.3 KD PROTEIN IN SSM1-GRE1 INTERGENIC REG       606  0   630    688 dPSselDtSalkkLY
YPB4_CAEEL|Q11107     HYPOTHETICAL ZINC FINGER PROTEIN B03B8.4 IN CHROMOSOME I       606  0  1971   2111 fPAdvnqdqVIaHIl
TYRA_HAEIN|P43902     CHORISMATE MUTASE (EC 5.4.99.5) (CM) / PREPHENATE DEHYDR       605  0   309    377 imdkSenLaVIEtLk
YOUG_BACLI|Q45292     HYPOTHETICAL 17.3 KD PROTEIN IN GNTR 5'REGION                  602  0   104    147 ihPfiPnLSfIkNkr
GLND_MYCTU|Q10961     PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE (EC 2.7.7.59)       601  0   405    808 WgrllPewePIrdLp
YO96_CAEEL|P41846     HYPOTHETICAL 93.9 KD PROTEIN T20B12.6 IN CHROMOSOME III        598  0   412    843 pQShdPmmaPsrswW
TRFE_RABIT|P19134     SEROTRANSFERRIN PRECURSOR (SIDEROPHILIN) (BETA-1-METAL B       592  0   361    694 WcAlShHerlkcdeW
YDIL_ECOLI|P76196     HYPOTHETICAL 15.0 KD PROTEIN IN LPP-AROD INTERGENIC REGI       592  0    95    127 fQrvyPDgNfIdwki
MAOC_FLAPR|P36444     MALATE OXIDOREDUCTASE, CHLOROPLAST PRECURSOR (EC 1.1.1.4       590  0    19    647 tQSQSvrLSVrrpMv
GLGA_METJA|Q59001     PROBABLE GLYCOGEN SYNTHASE (EC 2.4.1.21) (STARCH [BACTER       588  0   473    521 ydeNSPlsmmmkNcY
NRAM_INBHK|P16191     NEURAMINIDASE (EC 3.2.1.18)                                    586  0    46    466 aPtmSlDcanvsNVq
NRAM_INBSI|P16203     NEURAMINIDASE (EC 3.2.1.18)                                    586  0    46    466 aPtmSlDcanvsNVq
DPOM_CLAPU|P22373     PROBABLE DNA POLYMERASE (EC 2.7.7.7) | PS00116                 584  0   332   1063 WtringnfNtlyNLe
NOD1_RHIGA|P50331     NODULATION PROTEIN D I | PS00044                               584  0    33    310 qPAmSaaiarlrNyf
TRA0_ECOLI|P15025     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS21                584  0   360    390 WQtvPeHhaPlwqqv
Y08F_MYCTU|Q11052     PROBABLE REGULATORY PROTEIN CY50.15 | PS50006                  584  0   130    388 feqaSrHLSaalreW
OE66_NPVAC|Q00704     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         583  0   144    704 yQnPelayNlIngLr
PARF_PARTE|P47244     PARAFUSIN | PS00710                                            582  0   404    582 fgtgSnHirekdgIW
RL17_SCHPO|O59794     60S RIBOSOMAL PROTEIN L17 | PS00464                            581  0   138    187 ylSsPSHieIIvaee
SN2L_CAEEL|P41877     POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L                  580  0   247    971 litgtPlqNnlheLW
RFAB_ECOLI|P27127     LIPOPOLYSACCHARIDE 1,6-GALACTOSYLTRANSFERASE (EC 2.4.1.-       578  0   232    369 cQAygreLNIddrIv
MAOX_PHAVU|P12628     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        577  0   174    589 WPekSiqViVvtdge
MAOX_POPTR|P34105     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        576  0   176    591 WPqkSiqViVvtdge
OE66_NPVOP|O10305     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         575  0   255    682 gnglhPDsiyIdHLd
TRA0_SHISO|P16944     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS640               575  0    56    315 pfmdyiDmrlaENVW
ITA2_HUMAN|P17301     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) (COLL       574  0   162   1181 sPAtqPcpSlIdvVv
NRAM_INBBE|P27907     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   141    465 yngtreDrNklrHLi
NRAM_INBLN|P16193     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   141    465 yngtreDrNklrHLi
NRAM_INBMF|P16199     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   141    465 yngtreDrNklrHLi
NRAM_INBUS|P16205     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   142    466 yngtreDrNklrHLi
NRAM_INBVI|P16207     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   141    465 yngtreDrNklrHLi
NRAM_INBYB|Q90021     NEURAMINIDASE (EC 3.2.1.18)                                    574  0   142    466 yngtreDrNklrHLi
MA2X_HUMAN|P49641     ALPHA-MANNOSIDASE IIX (EC 3.2.1.114) (MANNOSYL-OLIGOSACC       573  0   992   1139 stSyPSlLShltsMY
GYRB_ACIS6|Q44277     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       571  0   161    216 mQAilPlkgkIlNVe
GYRB_ACIS9|Q44276     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       571  0   161    216 mQAilPlkgkIlNVe
YNC4_YEAST|P53970     HYPOTHETICAL 27.7 KD PROTEIN IN UME3-HDA1 INTERGENIC REG       571  0   143    246 gePlSaDfSPqEgam
CP4C_BLADI|P29981     CYTOCHROME P450 4C1 (EC 1.14.14.1) (CYPIVC1) | PS00086         570  0   126    511 WhShrkmitPtfHfk
DHA6_YEAST|P54115     ALDEHYDE DEHYDROGENASE, CYTOSOLIC (EC 1.2.1.3) | PS00070       569  0    99    501 leSQidlVSsIEaLd
MSH5_YEAST|Q12175     MUTS PROTEIN HOMOLOG 5 | PS00486                               569  0   490    901 svlmePlLdgIpNLq
KINN_HUMAN|Q12840     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        567  0   255   1032 nkSlSalgNVIsaLa
KINN_MOUSE|P28738     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        567  0   255   1027 nkSlSalgNVIsaLa
YQHN_BACSU|P54512     HYPOTHETICAL 16.7 KD PROTEIN IN GCVT-SPOIIIAA INTERGENIC       564  0   122    142 ddARkkDLksIqkkt
NUCL_MOUSE|P09405     NUCLEOLIN (PROTEIN C23) | PS00030                              560  0   512    706 kvPQnPHgkPkgyaf
HBB1_TRICR|P10785     HEMOGLOBIN BETA-1 CHAIN (MAJOR) | PS01033                      555  0    79    145 lkAyyaDLStIhckk
CRTI_RHOCA|P17054     PHYTOENE DEHYDROGENASE (EC 1.3.-.-) (PHYTOENE DESATURASE       552  0   132    524 WdAkaryefgyENLg
GSHC_SCHMA|Q00277     GLUTATHIONE PEROXIDASE (EC 1.11.1.9) (GPX) | PS00460 | P       552  0    25    169 lekyrgHVclIvNVa
HOFB_HAEIN|P44622     PROTEIN TRANSPORT PROTEIN HOFB HOMOLOG | PS00662               552  0   321    464 flrQdPDiimlgeIr
MAOX_VITVI|P51615     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        550  0   575    591 kyAeScmySPvyrsY
PSRC_WOLSU|P31077     POLYSULFIDE REDUCTASE CHAIN C (SULPHUR REDUCTASE CHAIN C       549  0   123    317 degPfgfLaPlaNIa
GLO2_HUMAN|Q16775     HYDROXYACYLGLUTATHIONE HYDROLASE (EC 3.1.2.6) (GLYOXALAS       542  0   122    260 ggSePPaVftgdtLf
MAOC_LYCES|P37222     MALATE OXIDOREDUCTASE, CHLOROPLAST (EC 1.1.1.4 (FRAGMENT       539  0   513    573 nfekgtHipPfsNIr
YFJJ_ECOLI|P52125     HYPOTHETICAL 24.6 KD PROTEIN IN ALPA-GABD INTERGENIC REG       539  0   174    208 eQtySdlmNrvdyMt
AST5_DROME|P10083     ACHAETE-SCUTE COMPLEX PROTEIN T5 (ACHAETE) | PS00038           536  0   151    201 atStiPgatPpnNfh
YENR_YEREN|P54295     YENR REGULATORY PROTEIN | PS00622                              536  0    36    244 nkktPlHptIIsNyp
MAOX_MESCR|P37223     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        535  0   170    585 WPekkiqViVvtdge
YBDM_ECOLI|P77174     HYPOTHETICAL 23.9 KD PROTEIN IN CSTA-DSBG INTERGENIC REG       529  0    55    209 sQlmPnDyNPnnvap
NUCL_HUMAN|P19338     NUCLEOLIN (PROTEIN C23) | PS00030                              527  0   479    706 WsgeSktLvlsnlsY
YM8I_YEAST|Q03529     HYPOTHETICAL 44.9 KD PROTEIN IN URA10-NRC1 INTERGENIC RE       519  0   279    384 rlvmPPtLfVIlcap
THIS_ECOLI|O32583     THIS PROTEIN                                                   480  0    36     66 nQqivPreqwaqHIv
