# BLOCKS Bibliography

Blocks papers in Postcript and PDF format.

The current references for the Blocks Database are:

- J.G. Henikoff, E.A. Greene, S. Pietrokovski & S. Henikoff, "Increased coverage of protein families with the blocks database servers", Nucl. Acids Res. 28:228-230 (2000).
  MEDLINE NAR Article

- S. Henikoff, J.G. Henikoff & S. Pietrokovski, "Blocks+: A non-redundant database of protein alignment blocks dervied from multiple compilations", Bioinformatics 15(6):471-479 (1999).
  MEDLINE PDF

If you use the Block Searcher as a tool in your published research, we ask that you cite:

- S. Henikoff & J. G. Henikoff, "Protein family classification based on searching a database of blocks", Genomics 19:97-107 (1994).
  MEDLINE Postscript PDF

If you use the Block Maker as a tool in your published research, we ask that you cite:

- S. Henikoff, J. G. Henikoff, W. J. Alford & S. Pietrokovski, "Automated construction and graphical presentation of protein blocks from unaligned sequences", Gene-COMBIS, Gene 163 (1995) GC 17-26.
  MEDLINE Gene-COMBIS Article Postscript PDF

If you use LAMA as a tool in your published research, we ask that you cite:

- S. Pietrokovski, "Searching Databases of Conserved Seqeuence Regions by Aligning Protein Multiple-Alignments", Nucl. Acids Res. 24:3836-3845 (1996).
  MEDLINE NAR Article Postscript PDF

If you use CODEHOP as a tool in your published research, we ask that you cite:

- T.M. Rose, E.R. Schultz, J.G. Henikoff, C.M. McCallum & S. Henikoff, "Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly-related sequences", Nucl. Acids Res. 26:1628-1635 (1998).
  MEDLINE NAR Article Postscript PDF

If you use SIFT as a tool in your published research, we ask that you cite:

- P.C. Ng and S. Henikoff, "SIFT: Predicting deleterious substitutions", Genome Res. 11:863-874 (2001).
  MEDLINE PDF

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Page last modified Nov 2004