$ vmersearch -output qseqnum  qpos counts sequence reads U89959.fna
# indexfilename = reads.mer
# alphasize = 4
# mersize = 19
# numofmers = 3166
# merbytes = 5
# prefixlength = 4
0	+5966	4	tcttcttcttcttcttctt
0	+17269	14	atatatatatatatatata
0	+17270	12	tatatatatatatatatat
0	+17271	14	atatatatatatatatata
0	+17272	12	tatatatatatatatatat
0	+71281	6	tcatcatcatcatcatcat
0	+71282	4	catcatcatcatcatcatc
0	+71283	6	atcatcatcatcatcatca
0	+71284	6	tcatcatcatcatcatcat
0	+71285	4	catcatcatcatcatcatc
0	+71286	6	atcatcatcatcatcatca
0	+71287	6	tcatcatcatcatcatcat
0	+77815	14	atatatatatatatatata
0	+77816	12	tatatatatatatatatat
0	+77817	14	atatatatatatatatata
0	+77818	12	tatatatatatatatatat
0	+77819	14	atatatatatatatatata
0	+77820	12	tatatatatatatatatat
0	+77821	14	atatatatatatatatata
0	+77822	12	tatatatatatatatatat
0	+77823	14	atatatatatatatatata
0	+77824	12	tatatatatatatatatat
0	+77825	14	atatatatatatatatata
0	+77826	12	tatatatatatatatatat
0	+77827	14	atatatatatatatatata
0	+77828	12	tatatatatatatatatat
0	+77829	14	atatatatatatatatata
0	+77830	12	tatatatatatatatatat
0	+77831	14	atatatatatatatatata
0	+77832	12	tatatatatatatatatat
# overall space peak: main=0.01 MB, secondary=0.12 MB
