#nexus

begin taxa;
  dimensions ntax=6;
  taxlabels
	'P. fimbriata'
	'P. robusta'
	'P. americana'
	'P. myriophylla'
	'P. polygama'
	'P. macrophylla'
  ;
  blockid bogus;
end;

[!
*************
* dna       *
*************
]
begin characters;
  dimensions nchar=45;
  format datatype=dna missing=? gap=-;
  title dna_forty_five;
	CHARLABELS labone labtwo labthree labfour labfive labsix labseven;

  matrix
	P._fimbriata    {a, G}cctcggcttaacgaacctcggcttaacgaacctcggcttaacga
	P._robusta      (a, , C)cctcggcttaaccaacctcggcttaacgaacctcggcttaacga
	P._americana    rcgtcgctttca---acgtcgctttcaccaacgtcgctttcacca
	P._myriophylla  acgtcgctttca---acgtcgctttcaccaacgtc?ctttcacca
	P._polygama     acgtcgctctcaccaacgtcgctttcaccaacgtc?ctttcacca
	P._macrophylla  acgtcgctctcaccaacgtcgctttcaccaacgtcgctttcacca
  ;
end;
BEGIN SETS;
    CHARSET csone (STANDARD CHARACTERS='dna forty five') = 1-3;
    CHARSET cstwo (CHARACTERS='dna forty five' STANDARD) = csone;
    CHARSET csthree = 5 labfour cstwo;
    CHARSET csfour = 4 labone - . \ 3 7;
    CHARSET csfive = 44 43 csthree  41   10 - 16 \2 18  40 42 45;
    CHARSET cssix (CHARACTERS='dna forty five') = labseven csthree csfour 6;
end;


BEGIN ASSUMPTIONS;
    
    EXSET csone (STANDARD CHARACTERS='dna forty five') = 1-3;
    EXSET cstwo (CHARACTERS='dna forty five' STANDARD) = csone;
    EXSET csthree = 5 labfour cstwo;
    EXSET * csfour = 4 labone - . \ 3 7;
    EXSET csfive = 44 43 csthree  41   10 - 16 \2 18  40 42 45;
    EXSET cssix (CHARACTERS='dna forty five') = labseven csthree csfour 6;
end;
