<?xml version="1.0" encoding="utf-8"?>
<cain version="1.7">
  <listOfModels>
    <model id="LacZ">
      <listOfSpecies>
        <species initialAmount="1" id="PLac"/>
        <species initialAmount="35" id="RNAP"/>
        <species initialAmount="350" id="Ribosome"/>
        <species initialAmount="0" id="RbsRibosome"/>
        <species initialAmount="0" id="PLacRNAP"/>
        <species initialAmount="0" id="LacZ"/>
        <species initialAmount="0" id="dgrLacZ"/>
        <species initialAmount="0" id="TrLacZ1"/>
        <species initialAmount="0" id="TrLacZ2"/>
        <species initialAmount="0" id="RbsLacZ"/>
        <species initialAmount="0" id="dgrRbsLacZ"/>
        <species initialAmount="0" id="TrRbsLacZ"/>
      </listOfSpecies>
      <listOfReactions>
        <reaction propensity="0.17" massAction="true" id="RNA_polymerase_binding">
          <listOfReactants>
            <speciesReference species="PLac"/>
            <speciesReference species="RNAP"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="PLacRNAP"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="10" massAction="true" id="RNA_polymerase_dissociation">
          <listOfReactants>
            <speciesReference species="PLacRNAP"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="PLac"/>
            <speciesReference species="RNAP"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="1" massAction="true" id="Closed_complex_isomerization">
          <listOfReactants>
            <speciesReference species="PLacRNAP"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="TrLacZ1"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="1" massAction="true" id="Prometer_clearance">
          <listOfReactants>
            <speciesReference species="TrLacZ1"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="RbsLacZ"/>
            <speciesReference species="PLac"/>
            <speciesReference species="TrLacZ2"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.015" massAction="true" id="mRNA_chain_elongation_and_RNAP_release">
          <listOfReactants>
            <speciesReference species="TrLacZ2"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="RNAP"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.17" massAction="true" id="Ribosome_binding">
          <listOfReactants>
            <speciesReference species="Ribosome"/>
            <speciesReference species="RbsLacZ"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="RbsRibosome"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.45" massAction="true" id="Ribosome_dissociation">
          <listOfReactants>
            <speciesReference species="RbsRibosome"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="Ribosome"/>
            <speciesReference species="RbsLacZ"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.4" massAction="true" id="RBS_clearance">
          <listOfReactants>
            <speciesReference species="RbsRibosome"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="TrRbsLacZ"/>
            <speciesReference species="RbsLacZ"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.015" massAction="true" id="LacZ_protein_synthesis">
          <listOfReactants>
            <speciesReference species="TrRbsLacZ"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="LacZ"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="6.42e-5" massAction="true" id="Protein_degradation">
          <listOfReactants>
            <speciesReference species="LacZ"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="dgrLacZ"/>
          </listOfProducts>
        </reaction>
        <reaction propensity="0.3" massAction="true" id="Functional_mRNA_degradation">
          <listOfReactants>
            <speciesReference species="RbsLacZ"/>
          </listOfReactants>
          <listOfProducts>
            <speciesReference species="dgrRbsLacZ"/>
          </listOfProducts>
        </reaction>
      </listOfReactions>
    </model>
  </listOfModels>
  <listOfMethods>
    <method equilibrationTime="0.0" startTime="0.0" recordingTime="2500.0" id="Direct" category="0" numberOfBins="32" multiplicity="4" method="0" timeDependence="0" numberOfFrames="101" options="0"/>
  </listOfMethods>
  <random seed="2147483648">
  </random>
</cain>
